24 Mar 2017 | Markus Konkol
Due to the overall topic of our project, we felt the Open Science Conference (#osc2017) taking place this week in Berlin would be a great chance to share our ideas and meet like-minded folks. We were happy about the notification that our poster was accepted and even made it into the top ten (of altogether 57 submissions), which allowed o2r team member Markus to give a three-minute lightning talk and present a project poster. Both days included interesting talks given by international speakers (see full programme) and in this post Markus reports on the trip.…
14 Feb 2017 | Daniel Nüst
The short course Reproducible computational research in the publication cycle (SC81) at the EGU general assembly was accepted by the short course programme group and scheduled Monday, April 24th, 2017 in the afternoon. Thanks!
We are grateful for the change to share our work on reproducible research together with members of the ReproZip team in a practical, hands-on short course.
Afterwards we welcome a number of esteemed speakers to share their views…
16 Jan 2017 | Daniel Nüst
We are happy to announce that our article Opening the Publication Process with Executable Research Compendia is now published in D-Lib Magazine’s current issue:
This paper was originally presented at the RepScience Workshop in September 2016 and was peer-reviewed as part of the workshop submission. It is published as Open Access along with other papers from the conference.
Nüst, D., Konkol, M., Pebesma, E., Kray, C., Schutzeichel, M., Przibytzin, H., Lorenz, J., 2017. Opening the Publication Process with Executable Research Compendia. D-Lib Magazine 23. doi:10.1045/january2017-nuest
05 Jan 2017 | Daniel Nüst
We are happy to announce that a pre-conference workshop “Reproducible Computational Geosciences” at the 20th AGILE International Conference on Geographic Information Science will be held on May 9 2017 in Wageningen, The Netherlands…
15 Dec 2016 | Daniel Nüst
This post gave the idea for the following 📢 PUBLISHED PAPER 🎉. It will not be updated anymore.
The Rockerverse: Packages and Applications
for Containerisation with R
Daniel Nüst, Dirk Eddelbuettel, Dom Bennett, Robrecht Cannoodt, Dav Clark, Gergely Daróczi, Mark Edmondson, Colin Fay, Ellis Hughes, Lars Kjeldgaard, Sean Lopp, Ben Marwick, Heather Nolis, Jacqueline Nolis, Hong Ooi, Karthik Ram, Noam Ross, Lori Shepherd, Péter Sólymos, Tyson Lee Swetnam, Nitesh Turaga, Charlotte Van Petegem, Jason Williams, Craig Willis and Nan Xiao. The R Journal (2020) 12:1, pages 437-461. doi:10.32614/RJ-2020-007
This post is regularly updated (cf. GH issue) and available under the URL http://bit.ly/docker-r. Last update: 11 Jan 2018.
Docker and R: How are they used and could they be used together?
That is the question that we regularly ask ourself.
And we try to keep up with other people’s work! In this post, we are going to share our insights with you.
Thanks to Ben Marwick for contributing to this post! You know about a project using Docker and R? Get in touch.
Several implementations of besides the one by R-core exist today, together with numerous integrations into open source and proprietary software (cf. English and German Wikipedia pages).
In the following we present the existing efforts for using open source R implementation with Docker.
The most prominent effort…